Plant-parasitic nematodes in potato crops of Cartago, Costa Rica: variation by altitude and soil
DOI:
https://doi.org/10.15517/5m2jd659Keywords:
Pratylenchus, Globodera , Meloidogyne, ensamblaje de nematodosAbstract
Introduction. Plant-parasitic nematodes (PPN) are a major problem for potato production. Updated information on PPN affecting potato (Solanum tuberosum) in Costa Rica is limited. Objective. To characterize the population genera of PPN in Cartago, with a focus on variations across different altitudes and soil properties. Materials and methods. Between 2015 and 2017, forty-five potato fields from northern Cartago, Costa Rica, were sampled and categorized by altitude: low (1600Ð2100 meters above sea level [m a.s.l.]), medium (2101Ð2600 m a.s.l.), and high (2601Ð3100 m a.s.l.). Composite soil and root samples were collected per field in a zigzag pattern for nematode analysis and soil characterization. Additional soil samples were collected for cyst quantification. Nematodes were extracted using centrifuge sugar-flotation for genus/family identification and the Fenwick method for cyst quantification. Abundance, frequency, and diversity (Hill’s N1 index) were compared across altitudes and sample types. Non-parametric tests (Kruskal-Wallis, Chi-square) and multivariate analyses (PCA, Spearman correlation) evaluated patterns and associations. Results. Thirteen genera/families were identified. Pratylenchus predominated in soil and roots, Meloidogyne showed the highest average density, and Globodera was more abundant at higher altitudes. In addition, nematode genera were associated with soil properties, and the presence of M. incognita and M. hapla was molecularly confirmed. Conclusions. Altitude and soil properties influenced the distribution of PPN in potato fields of Cartago.
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References
Ain, N., Naz, I., Maria, Alam, S. S., & Haris, M. (2024). Assessment of susceptibility of potato (Solanum tuberosum L.) cultivars to root lesion nematode, Pratylenchus penetrans, and disease impact on plant growth and tuber weight. Potato Research, 68(3), 1545–1569. https://doi.org/10.1007/s11540-024-09793-2
Alexander, S. A., & Waldenmaier, C. M. (2002). Suppression of Pratylenchus penetrans populations in potato and tomato using African marigolds. Journal of Nematology, 34(2), 130-134. https://journals.flvc.org/jon/article/view/67310
Archidona-Yuste, A., Wiegand, T., Castillo, P., & Navas-Cortés, J. A. (2020). Spatial structure and soil properties shape local community structure of plant-parasitic nematodes in cultivated olive trees in southern Spain. Agriculture, Ecosystems & Environment, 287, Article 106688. https://doi.org/10.1016/j.agee.2019.106688
Azlay, L., El Boukhari, M. E. M., Mayad, E. H., & Barakate, M. (2023). Biological management of root-knot nematodes (Meloidogyne spp.): A review. Organic Agriculture, 13(1), 99–117. https://doi.org/10.1007/s13165-022-00417-y
Bairwa, A., Venkatasalam, E. P., Mhatre, P. H., Bhatnagar, A., Sharma, A. K., Dalamu, B. D., Subhash, S., & Sharma, S. (2022). Biology and management of nematodes in potato. In E. P. Venkatasalam (Ed.), Sustainable management of potato pests and diseases (pp. 281–307). Springer Singapore. https://doi.org/10.1007/978-981-16-7695-6_11
Brown, M. J., Riedel, R. M., & Rowe, R. C. (1980). Species of Pratylenchus associated with Solanum tuberosum cv Superior in Ohio. Journal of Nematology, 12(3), 189–192. https://pmc.ncbi.nlm.nih.gov/articles/PMC2618023/#_pon93_
Camacho, M. J., Faria, J. M. S., & Inácio, M. L. (2025). Globodera. In N. Amaresan & K. Kumar (Eds.), Compendium of phytopathogenic microbes in agro-ecology (Vol. 3, pp. 405–423). Springer. https://doi.org/10.1007/978-3-031-81999-5_21
Canto-Saenz, M., & Brodie, B. B. (1986). Host efficiency of potato to Meloidogyne incognita and damage threshold densities on potato. Nematropica, 16(2), 109–116. https://journals.flvc.org/nematropica/article/view/63881
Caveness, F. E., & Jensen, H. J. (1955). Modification of the centrifugal-flotation technique for the isolation and concentration of nematodes and their eggs from soil and plant tissue. Proceedings of the Helminthological Society of Washington, 22, 87–89. http://science.peru.edu/COPA/html/archive.html
Chen, D., Barrett, R., Mimee, B., Arseneault, T., Comeau, L. P., Nahar, K., Ibarra Jimenez, S., & Zebarth, B. J. (2024). Prevalence of Verticillium spp. and Pratylenchus spp. in commercial potato fields in Atlantic Canada. American Journal of Potato Research, 101(4), 291–305. https://doi.org/10.1007/s12230-024-09957-3
Daneel, M., Engelbrecht, E., Fourie, H., & Ahuja, P. (2018). The host status of Brassicaceae to Meloidogyne and their effects as cover and biofumigant crops on root-knot nematode populations associated with potato and tomato under South African field conditions. Crop Protection, 110, 198–206. https://doi.org/10.1016/j.cropro.2017.09.001
Decreamer, W., & Geraert, E. (2013). Ectoparasitic nematodes. In R. N. Perry, & M. Moens (Eds.), Plant nematology (2nd ed., pp. 179–216). CABI. https://doi.org/10.1079/9781780641515.0179
Díaz-Romeu, R., & Hunter, A. (1978). Metodología de muestreo de suelos, análisis químico de suelos y tejido vegetal e investigación en invernadero. Centro Agronómico Tropical de Investigación y Enseñanza.
Durán-Quirós, A., González-Lutz, M. I., Vargas-Hernández, G., & Mora-Acedo, D. (2017). Situaciones de riesgo potencial relacionadas con la aplicación de agroquímicos en los sistemas hortícolas. Agronomía Costarricense, 41(2), 67–77. https://doi.org/10.15517/rac.v41i2.31300
Elshishka, M., Peneva, V., Lazarova, S., & Kumari, S. (2016). Characterisation of Trichodorus similis (Nematoda: Trichodoridae) associated with potato from the Czech Republic. Helminthologia, 53(4), 401–407. https://sciendo.com/es/article/10.1515/helmin-2016-0041
Fenwick, D. W. (1940). Methods for the recovery and counting of cysts of Heterodera schachtii from soil. Journal of Helminthology, 18(4), 155–172. https://doi.org/10.1017/S0022149X00031485
Figueiredo, J., Vieira, P., Abrantes, I., & Esteves, I. (2021). Detection of the root lesion nematode Pratylenchus penetrans in potato tubers. Plant Pathology, 70(8), 1960–1968. https://doi.org/10.1111/ppa.13425
Figueiredo, J., Vieira, P., Abrantes, I., & Esteves, I. (2022). Commercial potato cultivars exhibit distinct susceptibility to the root lesion nematode Pratylenchus penetrans. Horticulturae, 8(3), Article 244. https://doi.org/10.3390/horticulturae8030244
Flores Chaves, L. (2008). Identificación de especies de Meloidogyne descritas en Costa Rica con base en la variabilidad del ADN mitocondrial [Master’s thesis]. Universidad de Costa Rica.
García, C., Gómez Alpízar, L., Montero, Z., Salazar, L., & Valverde, R. (2007). Detección de Meloidogyne incognita en tubérculos de papa en Costa Rica. Agronomía Costarricense, 31(1), 77–84. https://doi.org/10.15517/rac.v31i1.6822
Gee, G. W., & Or, D. (2002). Particle-size analysis. In J. H. Dane & G. C. Topp (Eds.), Methods of soil analysis: Part 4—Physical methods (pp. 255–293). Soil Science Society of America. https://doi.org/10.2136/sssabookser5.4.c12
Gorny, A. M., Hay, F. S., & Pethybridge, S. J. (2020). Response of potato cultivars to the northern root-knot nematode, Meloidogyne hapla, under field conditions in New York State, USA. Nematology, 23(4), 425–433. https://doi.org/10.1163/15685411-bja10050
Handoo, Z. A., Carta, L. K., & Skantar, A. M. (2008). Taxonomy, morphology and phylogenetics of coffee-associated root-lesion nematodes, Pratylenchus spp. In R. M. Souza (Ed.), Plant-parasitic nematodes of coffee (pp. 29–50). Springer. https://doi.org/10.1007/978-1-4020-8720-2_3
Herve, G., Bertrand, B., Villain, L., Licardie, D., & Cilas, C. (2005). Distribution analyses of Meloidogyne spp. and Pratylenchus coffeae sensu lato in coffee plots in Costa Rica and Guatemala. Plant Pathology, 54(4), 471–475. https://doi.org/10.1111/j.1365-3059.2005.01206.x
Holgado, R., & Magnusson, C. (2012). Nematodes as a limiting factor in potato production in Scandinavia. Potato Research, 55(3–4), 269–278. https://doi.org/10.1007/s11540-012-9209-6
Holguin, C. M., Rojas, D. A., Pérez, O. Y., & Marchant, S. (2023). First detection of the potato cyst nematode, Globodera rostochiensis, infecting potato in the central region of Colombia. Plant Disease, 107(9), 2889. https://doi.org/10.1094/PDIS-04-23-0751-PDN
Holm, S. (1979). A simple sequentially rejective multiple test procedure. Scandinavian Journal of Statistics, 6(2), 65–70. http://www.jstor.org/stable/4615733
Humphreys-Pereira, D. A., Flores-Chaves, L., Gómez, M., Salazar, L., Gómez-Alpízar, L., & Elling, A. A. (2014). Meloidogyne lopezi n. sp. (Nematoda: Meloidogynidae), a new root-knot nematode associated with coffee (Coffea arabica L.) in Costa Rica, its diagnosis and phylogenetic relationship with other coffee-parasitising Meloidogyne species. Nematology, 16(6), 643–661. https://doi.org/10.1163/15685411-00002794
Jeyaprakash, A., Tigano, M. S., Brito, J., Carneiro, R. M. D. G., & Dickson, D. W. (2006). Differentiation of Meloidogyne floridensis from M. arenaria using high-fidelity PCR amplified mitochondrial AT-rich sequences. Nematropica, 36(1), 1-12. https://journals.flvc.org/nematropica/article/view/69725
Kemboi, B., Karuri, H., Nyaga, J. M., & Kingsbury, A. J. (2022). Vertical Distribution of Plant-Parasitic Nematodes in Sweet Potato. Journal of Nematology, 54(1), Article 20220025. https://doi.org/10.2478/jofnem-2022-0025
Kouser, Y., Shah, A. A., & Rasmann, S. (2021). The functional role and diversity of soil nematodes are stronger at high elevation in the lesser Himalayan Mountain ranges. Ecology and Evolution, 11(20), 13793–13804. https://doi.org/10.1002/ece3.8061
Kruskal, W. H., & Wallis, W. A. (1952). Use of ranks in one-criterion variance analysis. Journal of the American Statistical Association, 47(260), 583–621. https://doi.org/10.1080/01621459.1952.10483441
Kunwar, V., Guan, W., & Zhang, L. (2024). Identification and characterization of a virulent Meloidogyne incognita population breaking tomato Mi-1-mediated resistance in Indiana. Horticulturae, 10(6), Article 583. https://doi.org/10.3390/horticulturae10060583
Lima, F. S., Mattos, V. S., Silva, E. S., Carvalho, M. A., Teixeira, R. A., Silva, J. C., & Correa, V. R. (2018). Nematodes affecting potato and sustainable practices for their management. In M. Yildiz (Ed.), Potato — From Incas to all over the world. InTech. https://doi.org/10.5772/intechopen.73056
Llumiquinga, P., Cobo, R., Gallegos, P., Proaño, K., Buitrón, J., Camacho, M. J., Inácio, M. L., & Gutiérrez-Gutiérrez, C. (2025). Prevalence, genetic diversity, molecular phylogeny and phylogeography data of the potato cyst nematode, Globodera pallida, associated with potato crops in Ecuador. European Journal of Plant Pathology, 174, 323–336. https://doi.org/10.1007/s10658-025-03132-y
López, R., & Salazar, L. (1978). Morfometría y algunos hospedantes de Meloidogyne hapla en la cordillera volcánica central de Costa Rica. Agronomía Costarricense, 2(1), 29–38. https://www.mag.go.cr/rev_agr/v02n01_indice.html
Mai, W. F., & Mullin, P. G. (1996). Plant-parasitic nematodes: a pictorial key to genera. Cornell University Press.
Marian, F., Sandmann, D., Krashevska, V., Maraun, M., & Scheu, S. (2018). Altitude and decomposition stage rather than litter origin structure soil microarthropod communities in tropical montane rainforests. Soil Biology and Biochemistry, 125, 263–274. https://doi.org/10.1016/j.soilbio.2018.07.017
Méndez-Rivera, M., Ramírez-Morales, D., Montiel-Mora, J. R., & Rodríguez-Rodríguez, C. (2023). Ecotoxicity of pesticide formulations and their mixtures: The case of potato crops in Costa Rica. Ecotoxicology, 32(3), 383–393. https://doi.org/10.1007/s10646-023-02648-5
Mumladze, L., Murvanidze, M., Maraun, M., & Salakaia, M. (2015). Oribatid mite communities along an elevational gradient in Sairme gorge (Caucasus). Experimental and Applied Acarology, 66(1), 41–51. https://doi.org/10.1007/s10493-015-9893-4
Neher, D. A., & Darby, B. J. (2009). General community indices that can be used for analysis of nematode assemblages. In M. Wilson & T. Kakouli-Duarte (Eds.), Nematodes as environmental indicators (pp. 107–123). CABI.
Nelson, D. W., & Sommers, L. E. (1996). Total carbon, organic carbon, and organic matter. In D. L. Sparks, A. L. Page, P. A. Helmke, R. H. Loeppert, P. N. Soltanpour, M. A. Tabatabai, C. T. Johnston, & M. E. Sumner (Eds.), Methods of soil analysis: Part 3—Chemical methods (pp. 961–1010). Soil Science Society of America. https://doi.org/10.2136/sssabookser5.3.c34
Olthof, T. H. A. (1987). Effects of fumigants and systemic pesticides on Pratylenchus penetrans and potato yield. Journal of Nematology, 19(4), 424–430. http://pmc.ncbi.nlm.nih.gov/articles/PMC2618668/
Onditi, J. O., & Whitworth, J. L. (2025). Potato cyst nematodes (PCN), Globodera rostochiensis and G. pallida as a new challenging problem of potato production in Africa. American Journal of Potato Research, 102(1), 1–12. https://doi.org/10.1007/s12230-024-09968-0
Orlando, V., Roberts, D., Edwards, S. G., Prior, T., Neilson, R., & Back, M. A. (2024). Development and validation of four TaqMan real-time PCR diagnostics for the identification and quantification of Pratylenchus crenatus, Pratylenchus neglectus, Pratylenchus penetrans and Pratylenchus thornei. Nematology, 26(4), 433–445. https://doi.org/10.1163/15685411-bja10315
Perry, R. N., & Moens, M. (2024). Plant nematology (3rd ed.). CABI Publishing. https://doi.org/10.1079/9781800622456.0000
Persley, D., Cooke, T., & House, S. (2010). Diseases of vegetable crops in Australia. CSIRO Publishing.
Plaisance, A. R., McGawley, E. C., Overstreet, C., & Xavier-Mis, D. M. (2017). Evaluation of damage potential of urban turf-associated nematode communities under microplot conditions and influence of soil type on nematode reproduction. Nematropica, 47(1), 8–17. https://journals.flvc.org/nematropica/article/view/105053
Porazinska, D. L., Duncan, L. W., McSorley, R., & Graham, J. H. (1999). Nematode communities as indicators of status and processes of a soil ecosystem influenced by agricultural management practices. Applied Soil Ecology, 13(1), 69–86. https://doi.org/10.1016/S0929-1393(99)00018-9
Posit Team. (2024). RStudio: Integrated Development Environment for R [Computer software]. Posit Software, PBC. https://posit.co/
Powers, T. O., & Harris, T. S. (1993). A polymerase chain reaction method for identification of five major Meloidogyne species. Journal of Nematology, 25(1), 1–6. https://pmc.ncbi.nlm.nih.gov/articles/PMC2619349/
Programa Integral de Mercadeo Agropecuario. (2016). Análisis de consumo de frutas, hortalizas, pescado y mariscos en los hogares costarricenses. https://www.pima.go.cr/wp-content/uploads/2017/07/Analisis-Consumo.pdf
Prot, J.-C., & Van Gundy, S. D. (1981). Effect of soil texture and the clay component on migration of Meloidogyne incognita second-stage juveniles. Journal of Nematology, 13(2), 213–217. https://pmc.ncbi.nlm.nih.gov/articles/PMC2618074/
Pulavarty, A., Egan, A., Karpinska, A., Horgan, K., & Kakouli-Duarte, T. (2021). Plant parasitic nematodes: A review on their behaviour, host interaction, management approaches and their occurrence in two sites in the Republic of Ireland. Plants, 10(11), Article 2352. https://doi.org/10.3390/plants10112352
R Core Team. (2024). R: A language and environment for statistical computing (Version 4.4.1) [Computer software]. R Foundation for Statistical Computing. https://www.r-project.org/
Ramírez, A. (1979). Muestreo poblacional del nematodo dorado (Globodera rostochiensis) y otros nematodos asociados al cultivo de la papa (Solanum tuberosum L.). Agronomía Costarricense, 3(1), 13–20.
Riga, E., Karanastasi, E., Marcelo, C., Oliveira, G., & Neilson, R. (2007). Molecular identification of two stubby root nematode species. American Journal of Potato Research, 84(2), 161–167. https://doi.org/10.1007/BF02987139
Rode, H. (1962). Untersuchungen über das Wandervermögen von Larven des Kartoffelnematoden (Heterodera rostochiensis Woll.) in Modellversuchen mit verschiedenen Bodenarten. Nematologica, 7(1), 74–82. https://brill.com/view/journals/nema/7/1/article-p74_11.xml?srsltid=AfmBOoooIy3Wz2hOdZk0sow9jfVu4U9iWYFylQcETgIQ0LLetxKBy45h
Rowe, J. A. (2008). Globodera pallida (white potato cyst nematode). CABI Compendium. https://doi.org/10.1079/cabicompendium.27033
Sandoval-Ruiz, R., Flores-Chaves, L., & Humphreys-Pereira, D. A. (2020). Molecular characterization and distribution of Globodera pallida in the main production area of Costa Rica. Nematropica, 50(2), 218–228. https://journals.flvc.org/nematropica/article/view/128274
Sandoval-Ruiz, R., Gómez-Alpízar, L., Humphreys-Pereira, D. A., & Flores-Chaves, L. (2023). Molecular identification of root-lesion nematodes, Pratylenchus spp. in agricultural crops from Costa Rica. Agronomía Mesoamericana, 34(1), Article 49445. https://doi.org/10.15517/am.v34i1.49445
Secretaría Ejecutiva de Planificación Sectorial. (2023). Boletín estadístico agropecuario 2019-2022. Ministerio de Agricultura y Ganadería. https://www.mag.go.cr/bibliotecavirtual/BEA-0033.pdf
Sikora, R. A., Helder, J., Molendijk, L. P., Desaeger, J., Eves-van den Akker, S., & Mahlein, A. K. (2023). Integrated nematode management in a world in transition: Constraints, policy, processes, and technologies for the future. Annual Review of Phytopathology, 61(1), 209–230. https://doi.org/10.1146/annurev-phyto-021622-113058
Smit, A. L., & Vamerali, T. (1998). The influence of potato cyst nematodes (Globodera pallida) and drought on rooting dynamics of potato (Solanum tuberosum L.). European Journal of Agronomy, 9(2–3), 137–146. https://doi.org/10.1016/S1161-0301(98)00033-1
Stokstad, E. (2019). The new potato. Science, 363(6427), 574–577. https://doi.org/10.1126/science.363.6427.574
Trudgill, D. L. (1986). Yield losses caused by potato cyst nematodes: A review of the current position in Britain and prospects for improvements. Annals of Applied Biology, 108(1), 181–198. https://doi.org/10.1111/j.1744-7348.1986.tb01979.x
Umesh, K. C., Ferris, H., & Bayer, D. E. (1994). Competition between the plant-parasitic nematodes Pratylenchus neglectus and Meloidogyne chitwoodi. Journal of Nematology, 26(3), 286–295. https://journals.flvc.org/jon/article/view/66628
Vásquez, V., Montero-Astúa, M., & Rivera, C. (2006). Incidencia y distribución altitudinal de 13 virus en cultivos de Solanum tuberosum (Solanaceae) en Costa Rica. Revista de Biología Tropical, 54(4), 1135–1141. https://doi.org/10.15517/rbt.v54i4.3090
Vignola, R., Watler, W., Vargas-Céspedes, A., & Morales, M. (2017). Prácticas efectivas para la reducción de impactos por eventos climáticos en el cultivo de papa en Costa Rica [Technical sheet: potato crop]. Centro Agronómico Tropical de Investigación y Enseñanza.
Vovlas, N., Mifsud, D., Landa, B. B., & Castillo, P. (2005). Pathogenicity of the root-knot nematode Meloidogyne javanica on potato. Plant Pathology, 54(5), 657–664. https://doi.org/10.1111/j.1365-3059.2005.01244.x
Youssef, M. M. A. (2013). Potato nematodes and their control measures: A review. Archives of Phytopathology and Plant Protection, 46(11), 1371–1375. https://doi.org/10.1080/03235408.2013.767493
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